Hydrophobicity scales - Wikipedia
Hydrophobicity scales are values that define the relative hydrophobicity or hydrophilicity of amino acid residues. The more positive the value, the more hydrophobic are the amino acids located in that region of the protein. These scales are commonly used to predict the transmembrane alpha-helices of membrane proteins.
Amino Acids Reference Chart - MilliporeSigma
Refer to the charts and structures below to explore amino acid properties, types, applications, and availability. The hydrophobicity index is a measure of the relative hydrophobicity, or how soluble an amino acid is in water.
Peptide Hydrophobicity/Hydrophilicity Analysis Tool
The hydrophobicity index is a measure of the relative hydrophobicity, or how soluble an amino acid is in water. In a protein, hydrophobic amino acids are likely to be found in the interior, whereas hydrophilic amino acids are likely to be in contact with the aqueous environment.
Amino Acid Hydrophobicity
Amino Acid Hydrophobicity. In Chimera, amino acid residues are automatically assigned an attribute named kdHydrophobicity, with values according to the hydrophobicity scale of Kyte and Doolittle. The other scales in the following table are not assigned automatically, but input files to assign them with Define Attribute are linked below.
Amino Acid Hydrophobicity Table - Biological Magnetic …
Hydrophobic = L, Hydrophilic = W, Neutral = N Source References for information in the above tables and figures. Contact [email protected] if you have any questions about this site
Hydrophobicity scales - QIAGEN Bioinformatics
The hydrophobicity scale by Rose et al. is correlated to the average area of buried amino acids in globular proteins [Rose et al., 1985]. This results in a scale which is not showing the helices of a protein, but rather the surface accessibility.
Expasy - ProtScale
ProtScale allows you to compute and represent the profile produced by any amino acid scale on a selected protein. An amino acid scale is defined by a numerical value assigned to each type of amino acid. The most frequently used scales are the hydrophobicity or hydrophilicity scales and the secondary structure conformational parameters scales ...
HYDROPHOBICITY SCALES OF AMINO ACIDS | Download Table
This quantitative concept of hydrophobicity (see Table 6) stimulated efforts to correlate the stability of proteins with their total hydrophobicity calculated as a sum of the hydrophobicities...
General Amino Acid information in table format
General Amino Acid information in table format: Hydrophobicity chart; Chou - Fasman helix/sheet propensities; Amino acid codons; ASCII table summarizing all amino acid data; Source References for information in the above tables and figures.
Online Analysis Tools - Protein Chemistry
For the biochemical properties of amino acids see PROWL, Amino Acid Hydrophobicity and Amino Acid Chart and Reference Table (GenScript). If you are specifically interested in antibodies I would recommend that you visit " The Antibody Resource Page ."